Return to main results Retrieve Phyre Job Id

Job DescriptionP23484
Confidence78.07%DateThu Jan 5 11:39:30 GMT 2012
Rank227Aligned Residues44
% Identity20%Templatec3q9sA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra(1-215) from deinococcus radiodurans
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130...... ...140...... ...150.........160....
Predicted Secondary structure 



...

.....


Query SS confidence 















. . .









. . . . .

















Query Sequence  LNGKTREAFLLSQLDG. . . LTYSEIAHKL. . . . . GVSISSVKKYVAKAVEHC
Query Conservation 
      
  
    
... 
  


  
.....


  

   
 

   
Alig confidence 















...









.....

















Template Conservation 
   
      
        
   
   
         


  

 


 

Template Sequence  LSPKEFDILALLIRQPGRVYSRQEIGQEIWQGRLPEGSNVVDVHXANLRAKL
Template Known Secondary structure 

STT



TT
S
TT
S
Template Predicted Secondary structure 













Template SS confidence 



















































   149150.........160.........170.........180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions