Job Description P23484 Confidence 99.91% Date Thu Jan 5 11:39:30 GMT 2012 Rank 2 Aligned Residues 167 % Identity 14% Template c2q1zA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rpoe, ecf sige; PDBTitle: crystal structure of rhodobacter sphaeroides sige in complex with the2 anti-sigma chrr Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		M	S	D	R	A	T	T	.	T	A	S	L	T	F	E	S	L	Y	G	T	H	H	G	W	L	K	S	W	L	T	R	K	L	Q	S	A	F	D	A	D	D	I	A	Q	D	T	F	L	R	V	M	V	S	E	T	L	S	T	I	R	D	P	R	S	F	L	C	T	I	A	K	R	V	M	V	D	L	F	R	R
Query Conservation									.
Alig confidence									.																																																											.
Template Conservation																																																																				.
Template Sequence		L	M	R	A	I	R	D	H	R	D	E	A	A	F	A	E	L	F	Q	H	F	A	P	K	V	K	G	F	L	M	K	S	G	S	V	A	S	Q	A	E	E	C	A	Q	D	V	M	A	T	V	W	Q	K	A	H	L	F	D	P	S	R	A	S	V	A	T	.	W	I	F	T	I	A	R	N	R	R	I	D	G
Template Known Secondary structure																																	T	T																				S	G	G	G			T	T	T						.								T	S			T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	E	K	A	Y	L	E	M	L	A	L	M	P	E	G	G	A	P	S	P	E	E	R	E	S	Q	L	E	T	L	Q	L	L	D	S	M	L	D	G	L	N	G	K	T	R	E	A	F	L	L	S	Q	L	D	G	L	T	Y	S	E	I	A	H	K	L	G	V	S	I	S	S	V	K	K	Y	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	K	D	R	Q	P	E	P	E	D	L	F	W	G	P	D	S	E	P	D	Q	A	D	V	Y	E	M	Q	Q	E	N	A	R	L	G	R	A	I	A	R	L	P	E	A	Q	R	A	L	I	E	R	A	F	F	G	D	L	T	H	R	E	L	A	A	E	T	G	L	P	L	G	T	I	K	S	R	I	R	L
Template Known Secondary structure		T		S	S	S											S	S																								T	S														S			S	S			S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	H	C	L	L	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	D	R	L	R	Q	H	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions