Return to main results Retrieve Phyre Job Id

Job DescriptionP23484
Confidence87.22%DateThu Jan 5 11:39:30 GMT 2012
Rank122Aligned Residues44
% Identity20%Templatec2it0A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.... .....140.........150.........160...
Predicted Secondary structure 

.....






Query SS confidence 














. . . . .




























Query Sequence  GLNGKTREAFLLSQL. . . . . DGLTYSEIAHKLGVSISSVKKYVAKAVEH
Query Conservation   
      
  
   ..... 
 
  


  



  

   
 

   
Alig confidence 














.....




























Template Conservation   

   



 

  
           

  
 

  

   
  
   
Template Sequence  ELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERD
Template Known Secondary structure 

SSTT



TT

T
Template Predicted Secondary structure 












Template SS confidence 
















































   3......10.........20.........30.........40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions