Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF71
Confidence73.56%DateThu Jan 5 11:31:34 GMT 2012
Rank268Aligned Residues44
% Identity23%Templated2lfba_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30. ........ 40.........
Predicted Secondary structure 













...........................


Query SS confidence 

























. . . . . .







. . . . . . . . . . . . . . . . . . . . .









Query Sequence  STSKKPRKQHSPEFRSEALKLAERIG. . . . . . VTAAAREL. . . . . . . . . . . . . . . . . . . . . SLYESQLYNW
Query Conservation      
 

 

 


  

 
     ......
  

  
.....................

   

  
Alig confidence 

























......







.....................









Template Conservation   
 

 

 

  

  

  
  
 


   
  

  

                     


  
  
Template Sequence  KKGRRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNW
Template Known Secondary structure  S
SS
SS



TT
SS

ST

GGGGGGGGGG


Template Predicted Secondary structure 




































Template SS confidence 






































































   7..10.........20.........30.........40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions