Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF71
Confidence81.55%DateThu Jan 5 11:31:34 GMT 2012
Rank184Aligned Residues31
% Identity26%Templated1yioa1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30 .........40.........50.
Predicted Secondary structure 

.



Query SS confidence 









.




















Query Sequence  SEALKLAERI. GVTAAARELSLYESQLYNWRS
Query Conservation    

 
    . 
  

  


   

  
  
Alig confidence 









.




















Template Conservation    

     
 
  


  
 

  

     
Template Sequence  QQVLQLTIRGLMNKQIAGELGIAEVTVKVHRH
Template Known Secondary structure  TTT

T

Template Predicted Secondary structure 






Template SS confidence 































   148.150.........160.........170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions