Job Description P0CF71 Confidence 56.74% Date Thu Jan 5 11:31:34 GMT 2012 Rank 434 Aligned Residues 74 % Identity 14% Template c1iz1B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:lysr-type regulatory protein; PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		L	K	L	A	E	R	I	G	V	T	A	A	A	R	E	L	S	L	Y	E	S	Q	L	Y	N	W	R	S	K	Q	Q	N	Q	.	.	.	.	.	.	.	Q	T	S	S	E	R	E	L	E	M	S	T	E	I	A	R	L	K	R	Q	L	A	E	R	D	E	E	L	A	I	L	Q	K	A	A	T	Y	F	A	K
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.														.	.
Template Conservation																																																							.	.
Template Sequence		I	A	V	A	E	A	G	N	M	A	A	A	A	K	R	L	H	V	S	Q	P	P	I	T	R	Q	M	Q	A	L	E	A	D	L	G	V	V	L	L	E	R	S	H	R	G	I	E	L	T	A	A	G	H	.	.	A	F	L	E	D	A	R	R	I	L	E	L	A	G	R	S	G	D	R	S	R	A	A	A	R
Template Known Secondary structure									S									T	S																	T	S							S	S	S									.	.
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		97	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	V
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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