Return to main results Retrieve Phyre Job Id

Job DescriptionB8LFD7
Confidence5.27%DateThu Jan 5 10:55:41 GMT 2012
Rank10Aligned Residues27
% Identity22%Templatec2rddB_
PDB info PDB header:membrane protein/transport proteinChain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.
Predicted Secondary structure 





Query SS confidence 


























Query Sequence  LVALGFTLISVFTLSGPGPLSLLRRQV
Query Conservation               
    
     
  
Alig confidence 


























Template Conservation     
    




 






 


  
Template Sequence  LMLVVFGLIFYFMILRPQQKRTKEHKK
Template Known Secondary structure  TTT
Template Predicted Secondary structure 
Template SS confidence 


























   25....30.........40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions