Job Description P0A9K1 Confidence 98.75% Date Wed Jan 25 15:20:20 GMT 2012 Rank 19 Aligned Residues 125 % Identity 23% Template c4a4zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V
Query Conservation
Alig confidence																																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	D	T	F	Q	K	E	A	V	Y	H	L	E	Q	G	D	S	V	F	V	A	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	M	A	H	R	N	M	.	.	T	K	T	I	Y	T	S	P	I	K	A	L	S	N	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T									T	T	S		S														T	T	.	.								S		G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.														.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.						.	.															.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.						.	.															.	.	.	.
Query Sequence		Y	D	V	L	V	R	R	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	R	T	F	.	.	E	N	A	V	V	I	L	D	E	A	Q	N	V	T	.	.	.	.	A	A	Q	M	K	M	F	L	T	R
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.						.	.															.	.	.	.
Alig confidence												.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.															.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		F	R	D	F	K	E	T	F	V	N	.	.	.	.	.	.	I	G	L	I	T	G	D	V	Q	I	N	P	D	A	N	C	L	I	M	T	T	E	I	L	R	S	M	L	Y	R	G	A	D	L	I	R	D	V	E	F	V	I	F	D	E	V	H	Y	V	N	D	Q	D	R	G	V	V	W	E	E	V	I	I	M
Template Known Secondary structure							T	T				.	.	.	.	.	.						S	S					T	T	S	S																T		S	G	G	G	G									T	T				T	T		T	T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.							.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		292	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	N	V	T	V	I	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	Q	H	V	K	F	I	L	L
Template Known Secondary structure		S		T	T
Template Predicted Secondary structure
Template SS confidence
		465	.	.	.	.	470	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions