Job Description P0A9K1 Confidence 97.39% Date Wed Jan 25 15:20:20 GMT 2012 Rank 130 Aligned Residues 139 % Identity 15% Template c3mwyW_ PDB info PDB header:hydrolase Chain: W: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler Resolution 3.70 Å

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		156	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure										.	.	.	.																																				.
Query SS confidence										.	.	.	.																																				.
Query Sequence		Q	L	H	Y	L	K	A	I	.	.	.	.	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	.	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V
Query Conservation										.	.	.	.																																				.
Alig confidence										.	.	.	.																																				.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	T	G	I	N	W	M	A	F	L	W	S	K	G	D	N	G	I	L	A	D	E	M	G	L	G	K	T	V	Q	T	V	A	F	I	S	W	L	I	F	A	R	R	Q	N	G	P	H	I	I	V	V	P	L	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	A	W	L	D	T	F
Template Known Secondary structure														T	T	T									T	T	S	S	T	T															S			S								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.																.	.	.	440	.	.	.	.
		231	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250										.	.	.	.	.	.	.	.	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Query SS confidence									.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Query Sequence		Y	D	V	L	V	R	R	.	.	.	.	.	L	G	A	S	F	M	Q	Y	C	L	R	P	E	.	.	.	.	.	.	.	.	.	I	G	K	V	E	I	A	P	F	A	Y	M	R	G	.	.	.	.	.	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	N	V	.	.	T	A	A	Q	M	K	M	F	L
Query Conservation									.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Alig confidence									.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Template Conservation
Template Sequence		E	K	W	A	P	D	L	N	C	I	C	Y	M	G	N	Q	K	S	R	D	T	I	R	E	Y	E	F	Y	T	N	P	K	T	M	K	F	N	V	L	L	T	T	Y	E	Y	I	L	K	D	R	A	E	L	G	S	I	K	W	Q	F	M	A	V	D	E	A	H	R	L	K	N	A	E	S	S	L	Y	E	S	L
Template Known Secondary structure					S	T	T									S	S											S		S								S						T	T					T						T	S								T	T	G	G	G	G			S	S	S
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	G	E	N	V	T	V	I	V	N	G	D	I	T	Q	C	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	F	K	V	A	N	R	M	L	I	T	G	T	P	L	Q	N	N	I
Template Known Secondary structure		T	T	S										S				S	S		S
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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