Job Description P0A9K1 Confidence 98.30% Date Wed Jan 25 15:20:20 GMT 2012 Rank 39 Aligned Residues 134 % Identity 19% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		L	A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	.	.	.	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	V	K	K	F	E	S	E	I	L	E	A	I	S	Q	N	S	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A	E	C	N	I	V	V	T	Q	P	R	R	I	S	A	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	G	G	G	G	G												S								T	T	S	S																T	T		G	G	G								S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.														.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		F	R	P	V	Y	D	V	L	V	R	R	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	Y	M	R	G	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	.	.	N	V	T	A	A	Q	M	K	M	F	L	T	R
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	E	R	V	A	F	E	R	G	E	E	P	G	K	S	C	G	Y	S	V	R	F	E	S	I	L	P	R	P	H	A	S	I	X	F	C	T	V	G	V	L	L	R	K	L	E	A	G	I	R	G	I	S	H	V	I	V	D	E	I	H	E	R	D	I	N	T	D	F	L	L	V	V	L	R	D
Template Known Secondary structure		.	.	.	.							T	T	T			T	T	S	S						T	T							S	S	S																			T	T									T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		292				.	.	.	.	.	.	.	300	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		L	.	.	.	G	E	N	V	T	V	I	V	N
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		V	V	Q	A	Y	P	E	V	R	I	V	L	X
Template Known Secondary structure							T	T	S
Template Predicted Secondary structure
Template SS confidence
		530	.	.	.	.	.	.	.	.	.	540	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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