Job Description P0A9K1 Confidence 97.83% Date Wed Jan 25 15:20:20 GMT 2012 Rank 85 Aligned Residues 114 % Identity 18% Template c3h1tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:type i site-specific restriction-modification PDBTitle: the fragment structure of a putative hsdr subunit of a type2 i restriction enzyme from vibrio vulnificus yj016 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		156	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.								.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure													.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		Q	L	H	Y	L	K	A	I	E	S	K	.	.	.	.	.	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	.	.	.	.	.	.	.	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F
Query Conservation													.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																																.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		Q	Q	I	A	I	N	R	A	V	Q	S	V	L	Q	G	K	K	R	S	L	I	T	X	A	T	G	T	G	K	T	V	V	A	F	Q	I	S	W	K	L	W	S	A	R	W	N	R	T	G	D	Y	R	K	P	R	I	L	F	L	A	D	T	F	T	P	F	G	D	A	R	H	K	I	E	G	V	.	.	.	.
Template Known Secondary structure															T	T		S								T	T	S																T	T			S	S		S	S	S												T	T	T		S	S								.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	R	G	R	T	F	E	N	A	.	.	.	.	.	V	V	I	L	D	E	A	Q	N	V	T	A	A	Q	M	K	M	F	L	T	R	L	G	E	N	V	T	V
Query Conservation																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.										.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	S	R	E	I	Y	F	A	I	Y	Q	S	I	P	G	L	Y	K	E	F	P	Q	D	F	F	D	L	I	I	I	D	E	C	H	W	.	.	.	.	.	.	R	E	I	L	E	Y	F	E	P	A	F	Q	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S						G	G	G				G	G	G	G	S		T	T	S		S					S					.	.	.	.	.	.							S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
																											272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320
		299	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	N	G	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	X	T	A	T	P
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions