Job Description P0A9K1 Confidence 98.46% Date Wed Jan 25 15:20:20 GMT 2012 Rank 26 Aligned Residues 145 % Identity 14% Template c3ezkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna packaging protein gp17; PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions Resolution 34.00 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		L	R	D	Y	Q	R	D	M	L	K	I	M	S	S	K	R	M	T	V	C	N	L	S	R	Q	L	G	K	T	T	V	V	A	I	F	L	A	H	F	V	C	F	N	K	D	K	A	V	G	I	L	A	H	K	G	S	M	S	A	E	V	.	.	.	.	.	.	.	L	D	R	T	K	Q	A	I	E	L	L	P
Template Known Secondary structure																	S								T	T	S		T															S	S	S								S	S								.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																.	.																					.	.												.	.
Query SS confidence																																.	.																					.	.												.	.
Query Sequence		D	V	L	V	R	R	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	.	.	M	R	G	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	N	V	T	.	.	A	A	Q	M	K	M	F	L	T	R	L	.	.	G	E	N	V	T	V	I	V	N	G	D	I	T
Query Conservation																																.	.																					.	.												.	.
Alig confidence																																.	.								.	.												.	.												.	.
Template Conservation																																									.	.
Template Sequence		D	F	L	Q	P	G	I	V	E	W	N	K	G	S	I	E	L	D	N	G	S	S	I	G	A	Y	A	S	S	P	D	A	V	R	G	N	S	F	A	.	.	M	I	Y	I	D	E	C	A	F	I	P	N	F	H	D	S	W	L	A	I	Q	P	V	I	S	S	G	R	R	S	K	I	I	I	T	T	T	P	N
Template Known Secondary structure		T	T	T	S				S				T	T					T	T	S																S			S	.	.						S	G	G	G		S	S														S	S	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions