Job Description P0A9K1 Confidence 95.55% Date Wed Jan 25 15:20:20 GMT 2012 Rank 250 Aligned Residues 110 % Identity 17% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V
Query Conservation
Alig confidence														.	.																										.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																										.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	M	G	G	V	A	L	H	D	G	N	.	.	I	A	E	M	K	T	G	E	G	K	T	L	T	S	T	L	P	V	Y	L	N	A	L	T	G	.	.	K	G	V	H	V	V	T	V	N	E	Y	L	A	S	R	.	.	.	.	.	.	.	.	.	.	.	D	A	E	Q	M	G	K	I	F	E	F	L	G
Template Known Secondary structure		T										S	S	.	.					S	S	S	S		T													T	T	S	.	.	S							S								.	.	.	.	.	.	.	.	.	.	.					T							T	T
Template Predicted Secondary structure														.	.																										.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.
		236	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure						.	.	.	.	.																				.	.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.																				.	.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		R	R	L	G	.	.	.	.	.	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	.	.	.	.	F	A	Y	M	R	G	R	T	.	.	.	.	.	.	.	.	.	F	E	N	A	V	V	I	L	D	E	A	Q	N	V
Query Conservation						.	.	.	.	.																				.	.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.																				.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	V	G	L	N	L	N	S	M	S	K	D	E	K	R	E	A	Y	A	A	D	I	T	Y	S	T	N	N	E	L	G	F	D	Y	L	R	D	N	M	V	L	Y	K	E	Q	M	V	Q	R	P	L	H	F	A	V	I	D	E	V	D	S	I
Template Known Secondary structure						B			S	S			S	S								S	S																T	T	T		S		S															T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions