Job Description P0A9K1 Confidence 95.00% Date Wed Jan 25 15:20:20 GMT 2012 Rank 295 Aligned Residues 148 % Identity 9% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R
Query Conservation
Alig confidence																																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	M	T	Y	G	Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	.	.	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	L	I	V	T	A
Template Known Secondary structure					S	S	B		S	S									S	S	S	S															T	T	.	.								S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																			240	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	R	G	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	N	V	T	A	A	Q	M	K	M	F	L	T	R	L	.	.	.	.	G	E	N	V	T	V	I	V	N	G	D	I	T	Q	C	D	L	P	R	G	V
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N
Template Known Secondary structure		S									T	T	G	G	G	T			S														T	S								S	S		B															S		S	S									S	S	S	S	B		S		S	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		314	.	.				.	.	.	320	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		C	S	G	.	.	.	L	S	D	A	L	E	R	F	E
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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