Job Description P0A9K1 Confidence 98.02% Date Wed Jan 25 15:20:20 GMT 2012 Rank 66 Aligned Residues 178 % Identity 16% Template c3berA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx47; PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp Resolution 1.40 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	H	K	Q	R	E	E	E	S	V	T	S	L	V	Q	M	G	G	V	E	A	I	G	M	A	R	D	S	R	D	T	S	P	I	L	A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K
Query Conservation
Alig confidence																									.	.							.
Template Conservation																									.	.							.
Template Sequence		A	S	Q	P	I	V	E	E	E	E	T	K	T	F	K	D	L	G	V	T	D	V	L	.	.	C	E	A	C	D	Q	.	L	G	W	T	K	P	T	K	I	Q	I	E	A	I	P	L	A	L	Q	G	R	D	I	I	G	L	A	E	T	G	S	G	K	T	G	A	F	A	L	P	I	L	N	A	L	L	E	T
Template Known Secondary structure															T	G	G	G	T						.	.							.	T	T			S														T	T									T	T	S																	S
Template Predicted Secondary structure																									.	.							.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		195		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.
Predicted Secondary structure			.																																																																		.	.	.	.	.	.	.
Query SS confidence			.																																																																		.	.	.	.	.	.	.
Query Sequence		D	.	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	.	.	.	.	.	.	.	Y	M	R	G	R	T
Query Conservation			.																																																																		.	.	.	.	.	.	.
Alig confidence			.																		.	.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		P	Q	R	L	F	A	L	V	L	T	P	T	R	E	L	A	F	Q	I	.	.	.	.	.	.	.	S	E	Q	F	E	A	L	G	S	S	I	G	V	Q	S	A	V	I	V	G	G	I	D	S	M	S	Q	S	L	A	L	A	K	K	P	H	I	I	I	A	T	P	G	R	L	I	D	H	L	E	N	T	K	G
Template Known Secondary structure				S	S							S	S								.	.	.	.	.	.	.									G	G	G	T								T	T	S											T			S																S	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		267	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure						.	.	.														.	.	.	.
Query SS confidence						.	.	.														.	.	.	.
Query Sequence		F	E	N	A	.	.	.	V	V	I	L	D	E	A	Q	N	V	T	A	A	.	.	.	.	Q	M	K	M	F	L	T	R	L	G	E	N	V	T	V	I	V	N	G
Query Conservation						.	.	.														.	.	.	.
Alig confidence						.	.	.														.	.	.	.
Template Conservation
Template Sequence		F	N	L	R	A	L	K	Y	L	V	M	D	E	A	D	R	I	L	N	M	D	F	E	T	E	V	D	K	I	L	K	V	I	P	R	D	R	K	T	F	L	F	S
Template Known Secondary structure					T	T								S							T	T											S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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