 |
Job Description | P0A9K1 | Confidence | 93.39% | Date | Wed Jan 25 15:20:20 GMT 2012 |
Rank | 369 | Aligned Residues | 76 |
% Identity | 11% | Template | c2qroB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:deoxycytidine kinase; |
PDBTitle: human deoxycytidine kinase damp, udp, mg ion product complex
|
Resolution | 3.45 Å |
|
 |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | I | F | A | T | G | E | A | G | C | G | K | T | W | I | S | A | A | K | A | A | E | A | L | I | H | K | D | V | D | R | I | I | V | T | R | P | V | L | Q | A | D | E | D | L | G | F | L | P | G | D | I | A | E | K | F | A | P | Y | F | R | P | V | Y | D | V | L | V | R | R | L | G | A | S | F | M | Q | Y | C |
Query Conservation |   |
  |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |   |
|
|
|
|
|
|   |   | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | K | I | S | I | E | G | N | I | A | A | G | K | S | T | F | V | . |
. |
. |
. |
. |
. |
N | I | L | K | Q | L | C | E | D | W | E | V | V | P | E | P | V | A | R | W | C | N | V | Q | S | N | G | G | N | V | L | Q | M | M | Y | E | K | P | E | R | W | S | F | T | F | Q | T | Y | A | C | L | S | R | I | R | A | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  | T | T |
| T | T |  |  |  |  |
|
| T |  |  |  |  | T | S | S |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
247 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
L | R |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
L | A |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
109 | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|