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Job DescriptionP0A9K1
Confidence98.01%DateWed Jan 25 15:20:20 GMT 2012
Rank70Aligned Residues114
% Identity18%Templatec2qeqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:flavivirin protease ns3 catalytic subunit; PDBTitle: crystal structure of kunjin virus ns3 helicase
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  KQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQY
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Template Sequence  KQITVLDLHPGAGKTRRILPQIIKEAINRR. LRTAVLAPTRVVAAE. . . . . . . . . . . . . . . . . . . . . MAEALRGLPIRYQ
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   187..190.........200.........210...... ...220.........230. ........240....
 
   246...250.........260 ......... 270.........280.... .....290.........300.
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Query Sequence  CLRPEIGKVEIAPFA. . . . . YMRGRTFEN. AVVILDEAQNVTAAQ. . . . MKMFLTRLGENVTVIVN
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Template Sequence  TSANGNEIVDVMCHATLTHRLMSPHRVPNYNLFVMDEAHFTDPASIAARGYISTRVELGEAAAIFM
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   245....250.........260.........270.........280.........290.........300.........310
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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