Job Description P0A9K1 Confidence 98.22% Date Wed Jan 25 15:20:20 GMT 2012 Rank 48 Aligned Residues 185 % Identity 13% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	V	L	R	R	D	S	R	S	H	K	Q	R	E	E	E	S	V	T	S	L	V	Q	M	G	G	V	E	A	I	G	M	A	R	D	S	R	D	T	S	P	I	L	A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K
Query Conservation
Alig confidence																																	.	.									.
Template Conservation																																	.	.									.
Template Sequence		R	E	S	I	S	R	L	M	Q	N	Y	E	K	I	N	V	N	E	I	T	R	F	S	D	F	P	L	S	K	K	T	.	.	L	K	G	L	Q	E	A	Q	.	Y	R	L	V	T	E	I	Q	K	Q	T	I	G	L	A	L	Q	G	K	D	V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P
Template Known Secondary structure											T	T	T	T			G	G	G		S	B	G	G	G	S							.	.							T	T	.			B														T	T									T	T	S
Template Predicted Secondary structure																																	.	.									.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		A	A	E	A	L	I	H	K	D	V	D	.	.	.	.	.	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		V	L	E	A	L	Y	R	L	Q	W	T	S	T	D	G	L	G	V	L	I	I	S	P	T	R	E	L	A	Y	Q	T	.	.	.	.	.	.	.	F	E	V	L	R	K	V	G	K	N	H	D	F	S	A	G	L	I	I	G	G	L	K	H	E	A	E	R	I	N	N	I	N	I	L	V	C	T	P	G	R	L
Template Known Secondary structure									T	T			G	G	G									S	S								.	.	.	.	.	.	.								T	T	T	S	S																		T	T		S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		262	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure				.	.	.	.	.	.	.																.	.	.	.
Query SS confidence				.	.	.	.	.	.	.																.	.	.	.
Query Sequence		M	R	.	.	.	.	.	.	.	G	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	.	.	.	.	N	V	T	A	A	Q	M	K	M	F	L	T	R	L	G	E	N	V	T	V	I	V	N
Query Conservation				.	.	.	.	.	.	.																.	.	.	.
Alig confidence				.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L	D	E	A	D	R	I	L	D	M	G	F	A	D	T	M	N	A	V	I	E	N	L	P	K	K	R	Q	T	L	L	F
Template Known Secondary structure									S	S				T	T							T	T							T	T	T										T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions