Job Description P0A9K1 Confidence 98.31% Date Wed Jan 25 15:20:20 GMT 2012 Rank 38 Aligned Residues 134 % Identity 11% Template c2p6uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:afuhel308 helicase; PDBTitle: apo structure of the hel308 superfamily 2 helicase Resolution 3.14 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	L	A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F
Query Conservation
Alig confidence																																																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	G	I	L	F	P	P	Q	A	E	A	V	E	K	V	F	S	G	K	N	L	L	L	A	M	P	T	A	A	G	K	T	L	L	A	E	M	A	M	V	R	E	A	I	K	G	G	.	.	K	S	L	Y	V	V	P	L	R	A	L	A	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S						S	S	T							T	T		S							S	S																			T		.	.							S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.								.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		R	P	V	Y	D	V	L	V	R	R	L	G	A	.	.	.	.	.	.	.	.	.	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	.	.	.	.	.	.	.	R	G	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	N	V	T	.	.	.	.	.	.	.	A	A	Q
Query Conservation															.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Y	E	S	F	K	K	W	E	K	I	G	L	R	I	G	I	S	T	G	D	Y	E	S	R	D	E	H	L	G	D	C	D	I	I	V	T	T	S	E	K	A	D	S	L	I	R	N	R	A	S	W	I	K	A	V	S	C	L	V	V	D	E	I	H	L	L	D	S	E	K	R	G	A	T	L	E	I
Template Known Secondary structure		.	.	.					G	G	G	G	T	T	T								S			S				T	T	G	G	G		S															T	T		S	S	G	G	G							T	T	G	G	G	G	G		T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	M	F	L	T	R	L	G	E	N	V	T	V	I	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	T	K	M	R	R	M	N	K	A	L	R	V	I	G	L
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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