Job Description P0A9K1 Confidence 96.72% Date Wed Jan 25 15:20:20 GMT 2012 Rank 194 Aligned Residues 161 % Identity 14% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	.	.	L	G	A	S
Query Conservation																																																																												.	.
Alig confidence																													.																					.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																													.																					.	.	.	.	.	.	.	.	.
Template Sequence		R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	.	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	.	.	.	.	.	.	.	.	.	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	K
Template Known Secondary structure		S	S	S									T	T	S														.			T	T											S						.	.	.	.	.	.	.	.	.											T							S	S	S	S
Template Predicted Secondary structure																													.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.			.	.	.	.	.	.	.	290								.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.						.	.									.	.	.	.	.	.	.
Query SS confidence																																						.	.	.						.	.									.	.	.	.	.	.	.
Query Sequence		F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	R	G	R	T	F	E	N	A	V	V	I	L	D	E	A	.	.	.	Q	N	V	T	A	.	.	A	Q	M	K	M	F	L	T	.	.	.	.	.	.	.	R	L	G	E	N	V	T	V	I	V	N	G	D	I	T	Q	C	D	L
Query Conservation																																						.	.	.						.	.									.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.											.	.								.	.	.						.	.									.	.	.	.	.	.	.																	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.											.	.																																																	.	.	.
Template Sequence		A	A	T	V	L	S	K	A	.	.	.	.	.	.	.	.	.	V	K	R	G	K	E	E	G	Y	D	.	.	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	.	.	.
Template Known Secondary structure										.	.	.	.	.	.	.	.	.							T	T		S	.	.										S	S																				S	T	T			S								G	G	G	G	G	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.											.	.																																																	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.										.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	G	V	C	S	G	L	S	D	A	L	E	R	F	E	E	D	E	M	V	G	I	V	R	F	G	K	E	D	C	V	R	S	A	L	C	Q	R	T	L	H	A	Y
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G	L	I	L	T	K	L	D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L
Template Known Secondary structure		.	.	.	.	.	G	G											T									S		T	T		S		T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions