Job Description P0A9K1 Confidence 98.38% Date Wed Jan 25 15:20:20 GMT 2012 Rank 32 Aligned Residues 122 % Identity 14% Template c2jlrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp Resolution 2.0 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A
Query Conservation
Alig confidence																																					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	F	R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	.	L	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	L	R	G	L	P	I	R
Template Known Secondary structure			T	T	S	T	T									T	T	S	S	T	T	T	T												T	T	.								S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	S
Template Predicted Secondary structure																																					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																			.	.	.	.	.	.	.	.	240	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																							.	.	.	.	.	.	.									.															.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.									.															.	.	.	.
Query Sequence		S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	.	.	.	.	.	.	.	M	R	G	R	T	F	E	N	.	A	V	V	I	L	D	E	A	Q	N	V	T	A	A	.	.	.	.	Q	M	K	M	F	L	T	R	L	G	E	N	V	T	V	I	V	N
Query Conservation																							.	.	.	.	.	.	.									.															.	.	.	.
Alig confidence																							.	.	.	.	.	.	.									.															.	.	.	.
Template Conservation
Template Sequence		Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M	C	H	A	T	F	T	T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	A	I	F	M
Template Known Secondary structure					T	T	S	S					S	S	S																		S						S						S	T	T			S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions