Job Description P0A9K1 Confidence 97.32% Date Wed Jan 25 15:20:20 GMT 2012 Rank 138 Aligned Residues 105 % Identity 20% Template c2f55C_ PDB info PDB header:hydrolase/dna Chain: C: PDB Molecule:polyprotein; PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna Resolution 3.30 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A	.	.
Query Conservation																																																																																.	.
Alig confidence																												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	T	F	Q	V	A	H	L	H	A	P	T	G	S	G	K	S	T	K	V	P	A	A	Y	A	.	.	.	.	.	A	Q	G	Y	K	V	L	V	L	N	P	S	V	A	A	T	L	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Y	M	S	K	A	H	G	I	D	P
Template Known Secondary structure			S	S		B								S	S	S	S	T	T	T	T	S						.	.	.	.	.	T	T	S								S		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure																												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.																			.	240	.	.	.	.	.	.	.	.	.	250
			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.																			.	.	.												.
Query SS confidence		.																			.	.	.												.
Query Sequence		.	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	.	.	.	F	A	Y	M	R	G	R	T	F	E	N	.	A	V	V	I	L	D	E	A	Q	N	V	T	A	A	Q	M	K	M	F	L	T
Query Conservation		.																			.	.	.												.
Alig confidence		.																			.	.	.												.
Template Conservation
Template Sequence		N	I	R	T	G	V	R	T	I	T	T	G	G	S	I	T	Y	S	T	Y	G	K	F	L	A	D	G	G	C	S	G	G	A	Y	D	I	I	I	C	D	E	C	H	S	T	D	S	T	T	I	L	G	I	G	T
Template Known Secondary structure						S	S								S												T	T	S	S	S	T	T			S					T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions