Job Description P0A9K1 Confidence 97.56% Date Wed Jan 25 15:20:20 GMT 2012 Rank 109 Aligned Residues 95 % Identity 12% Template c2db3D_ PDB info PDB header:hydrolase/rna Chain: D: PDB Molecule:atp-dependent rna helicase vasa; PDBTitle: structural basis for rna unwinding by the dead-box protein2 drosophila vasa Resolution 2.20 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	H	K	Q	R	E	E	E	S	V	T	S	L	V	Q	M	G	G	V	E	A	I	G	M	A	R	D	S	R	D	T	S	P	I	L	A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K
Query Conservation
Alig confidence																									.	.									.
Template Conservation																									.	.									.
Template Sequence		K	V	T	G	S	D	V	P	Q	P	I	Q	H	F	T	S	A	D	L	R	D	I	I	.	.	I	D	N	V	N	K	S	G	.	Y	K	I	P	T	P	I	Q	K	C	S	I	P	V	I	S	S	G	R	D	L	M	A	C	A	Q	T	G	S	G	K	T	A	A	F	L	L	P	I	L	S	K	L	L	E	D
Template Known Secondary structure					S	S	S						S	S	T	T	S	S							.	.							T	T	.			S														T	T									T	T	S																	S
Template Predicted Secondary structure																									.	.									.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		195	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		D	V	D	.	.	.	.	.	.	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		P	H	E	L	E	L	G	R	P	Q	V	V	I	V	S	P	T	R	E	L	A	I	Q	I
Template Known Secondary structure						B	T	T	B		S						S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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