Job Description P0A9K1 Confidence 97.64% Date Wed Jan 25 15:20:20 GMT 2012 Rank 101 Aligned Residues 185 % Identity 22% Template c1z3iX_ PDB info PDB header:recombination/dna binding Chain: X: PDB Molecule:similar to rad54-like; PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54 Resolution 3.00 Å

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		110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.										.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.
Predicted Secondary structure											.	.																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	D	S	R	S	H	K	.	.	Q	R	E	E	E	S	V	T	S	L	V	Q	M	G	G	V	E	A	I	G	M	A	R	D	S	R	D	T	S	P	I	L	A	R	N	.	.	.	.	.	.	.	.	.	E	A	Q	L	H	Y	L	K	A	I	.	.	.	.	.	.	.	.	.	E	S	K	Q	L	I
Query Conservation											.	.																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence											.	.																																				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	R	A	G	V	R	K	A	L	H	D	P	F	E	D	G	A	L	V	L	Y	E	P	P	A	I	S	A	H	D	L	I	K	A	D	K	E	K	L	P	V	H	V	V	V	D	P	V	L	S	K	V	L	R	P	H	Q	R	E	G	V	K	F	L	W	D	C	V	T	G	R	R	I	E	N	S	Y	G	C
Template Known Secondary structure		S	S		S	S	S				S	S		T	T	S	T	T																		S		G	G	G	S												T	T																	T	T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																																												.	.	.	.	.
Query SS confidence																													.	.	.	.	.																																												.	.	.	.	.
Query Sequence		F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	.	.	.	.	.	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	.	.	.	.	.
Query Conservation																													.	.	.	.	.																																												.	.	.	.	.
Alig confidence																													.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	M	A	D	E	M	G	L	G	K	T	L	Q	C	I	T	L	I	W	T	L	L	K	Q	S	P	D	C	K	P	E	I	D	K	V	I	V	V	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	V	R	N	W	Y	N	E	V	G	K	W	L	G	G	R	V	Q	P	V	A	I	D
Template Known Secondary structure							T	T	S																		T	T	S	S		S		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																G	G	G
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	R	.	.	.	.	.	G	R	T	F	E	N	A	V	V	I	L	D	E	A	Q	N	V	.	.	T	A	A	Q	M	K	M	F	L	T	R	L	G	E	N	V	T	V	I	V	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																		.	.
Template Conservation
Template Sequence		G	G	S	K	D	E	I	D	S	K	L	V	N	F	I	S	Q	Q	G	M	R	I	P	T	P	I	L	I	I	S	Y	E	T	F	R	L	H	A	E	V	L	H	K	G	K	V	G	L	V	I	C	D	E	G	H	R	L	K	N	S	D	N	Q	T	Y	L	A	L	N	S	M	N	A	Q	R	R	V	L	I	S
Template Known Secondary structure		S	S																	S	S			S															T	T	T	T	T	T	S								T	T	G	G	G			T	T														S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	I	T	Q	C	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	P	I	Q	N	D	L
Template Known Secondary structure		S	S		S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions