Job Description P0A9K1 Confidence 97.90% Date Wed Jan 25 15:20:20 GMT 2012 Rank 79 Aligned Residues 109 % Identity 17% Template c1ymfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp Resolution 2.60 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A	S
Query Conservation
Alig confidence																																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	L	K	K	G	X	T	T	V	L	D	F	H	P	G	A	G	K	T	R	R	F	L	P	Q	I	L	A	E	C	A	R	R	R	.	L	R	T	L	V	L	A	P	T	R	V	V	L	S	E	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	A	F	H	G	L	D	V	K	F
Template Known Secondary structure		T	T	S	T	T									T	T	S		T	T	T	T													T	.								S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S
Template Predicted Secondary structure																																				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.																			.	.	.	240	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.										.
Query SS confidence																					.	.	.	.	.	.	.										.
Query Sequence		F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	.	.	.	.	.	.	.	Y	M	R	G	R	T	F	E	N	.	A	V	V	I	L	D	E	A	Q	N	V	T	A	A	Q	M	K	M	F	L
Query Conservation																					.	.	.	.	.	.	.										.
Alig confidence																					.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		H	T	Q	A	F	S	A	H	G	S	G	R	E	V	I	D	A	X	C	H	A	T	L	T	Y	R	X	L	E	P	T	R	V	V	N	W	E	V	I	I	X	D	E	A	H	F	L	D	P	A	S	I	A	A	R	G
Template Known Secondary structure			S	S								S	S																	S	S							S					T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions