 |
Job Description | P0A9K1 | Confidence | 96.89% | Date | Wed Jan 25 15:20:20 GMT 2012 |
Rank | 171 | Aligned Residues | 72 |
% Identity | 22% | Template | c1iy2A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; |
PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
|
Resolution | 3.20 Å |
|
 |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | S | H | K | Q | R | E | E | E | S | V | T | S | L | V | Q | M | G | G | V | E | A | I | G | M | A | R | D | S | R | D | T | S | P | I | L | A | R | N | E | A | Q | L | H | Y | L | K | A | I | E | S | K | Q | L | I | F | A | T | G | E | A | G | C | G | K | T | W | I | S | A | A | K | A | A | E | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|   | . |   |   |   |
|
|
|   |
|   |   |   |   | . | . |
|   |   |
|   |   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |
Template Sequence |   |
S | R | A | R | V | L | T | E | A | P | K | . |
V | T | F | K | D | V | A | G | A | E | E | A | . |
. |
K | E | E | L | K | E | I | V | . |
E | F | L | K | N | P | S | R | F | H | E | M | G | . |
A | R | I | P | K | G | V | L | L | V | G | P | P | G | V | G | K | T | H | L | A | R | A | V | A | G | E | A |
Template Known Secondary structure |   |
|
|
|
|
| B |
|
|
|
|
| . |
|
| G | G | G | S | S | S |
|  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
|  |  |  |  |  |  | T | T | . |
|
|
|
|
|  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
| . |
|
|  |  |  |  |
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |
|  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | |
. | . | . | . | . | . | . | 160 | . | . | . | . | |
|
. | . | . | . | . | 170 | . | . | |
. | . | . | . | . | . | . | 180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|