Job Description P0A9K1 Confidence 97.16% Date Wed Jan 25 15:20:20 GMT 2012 Rank 149 Aligned Residues 117 % Identity 18% Template c1cu1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (protease/helicase ns3); PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus Resolution 2.50 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L	G	A	S
Query Conservation
Alig confidence																														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	Q	S	F	Q	V	A	H	L	H	A	P	T	G	S	G	K	S	T	K	V	P	A	A	Y	A	A	.	.	.	.	.	Q	G	Y	K	V	L	V	L	N	P	S	V	A	A	T	L	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Y	M	S	K	A	H	G	I	D
Template Known Secondary structure				S	S										T	T	S		T	T	T									.	.	.	.	.	T	T								S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1193	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220						.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.																			.	1240	.	.	.	.	.	.	.	.	.
					242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.	.																						.	.								.	.																				.	.	.	.	.
Query SS confidence		.	.	.																						.	.								.	.																				.	.	.	.	.
Query Sequence		.	.	.	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	.	.	R	G	R	T	F	E	N	.	.	A	V	V	I	L	D	E	A	Q	N	V	T	A	A	Q	M	K	M	F	.	.	.	.	.	L	T	R	L	G	E	N	V	T	V	I	V	N
Query Conservation		.	.	.																						.	.								.	.																				.	.	.	.	.
Alig confidence		.	.	.																						.	.								.	.																				.	.	.	.	.
Template Conservation
Template Sequence		P	N	I	R	T	G	V	R	T	I	T	T	G	A	P	V	T	Y	S	T	Y	G	K	F	L	A	D	G	G	C	S	G	G	A	Y	D	I	I	I	C	D	E	C	H	S	T	D	S	T	T	I	L	G	I	G	T	V	L	D	Q	A	E	T	A	G	A	R	L	V	V	L	A
Template Known Secondary structure							S	S								S												T	T	S			T	T	S		S					T	T	T	T			S														T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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