Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACN4
Confidence100.00%DateThu Jan 5 11:18:36 GMT 2012
Rank11Aligned Residues175
% Identity45%Templated2o9aa1
SCOP infoProfilin-like GAF domain-like IclR ligand-binding domain-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120..... ....130.........140.........150.........160.........170
Predicted Secondary structure 







..






















Query SS confidence 
































. .












































Query Sequence  IHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGN. . EAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELM
Query Conservation       
     
 
  

     

 
 
    ..    
               
   

  

 
  


        
Alig confidence 
































..












































Template Conservation       
   
 
 
  
      

 
 
        
 
               
 
 

  

 
  


        
Template Sequence  HMSRNLLAIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVT
Template Known Secondary structure 


TSTTTT

S
SS




TT

TTTSTTS
Template Predicted Secondary structure 























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   171........180.........190.........200.........210.........220.........230.........240.........250
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  SIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQ
Query Conservation    
                  
   
  

  
 
    
   
   

 

    
    



               
Alig confidence 















































































Template Conservation    
                  
   
  

  


    
   
   




    
   


 
               
Template Sequence  KLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISISGPISRITDDRVTEF
Template Known Secondary structure  S




SSTT


STSSSSSTT
TTS
TTTS
Template Predicted Secondary structure 































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   251........260.......
Predicted Secondary structure 

Query SS confidence 
















Query Sequence  GELVRDTARDISTALGL
Query Conservation     
  

  

  

 
Alig confidence 
















Template Conservation     
   
  

  

 
Template Sequence  GAMVIKAAKEVTLAYGG
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 
















   162.......170........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions