Job Description P0ACN4 Confidence 100.00% Date Thu Jan 5 11:18:36 GMT 2012 Rank 4 Aligned Residues 241 % Identity 26% Template c2ia2D_ PDB info PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 Resolution 2.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	L	E	R	G	I	A	I	L	Q	Y	L	E	K	S	G	G	S	S	S	V	S	D	I	S	L	N	L	D	L	P	L	S	T	T	F	R	L	L	K	V	L	Q	A	A	D	F	V	Y	Q	D	S	Q	L	G	W	W	H	I	G	L	G	V	F	N	V	G	A	A	Y	I	H	N	R	D	V	L	S
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		V	Q	S	L	A	R	G	L	A	V	I	R	C	F	D	H	R	N	Q	R	R	T	L	S	D	V	A	R	A	T	D	L	T	R	A	T	A	R	R	F	L	L	T	L	V	E	L	G	Y	V	.	.	.	.	.	.	A	A	F	W	L	T	P	R	V	L	E	L	G	Y	S	Y	L	S	S	L	S	L	P	E
Template Known Secondary structure														T			S	S														T																T	T	S	B	.	.	.	.	.	.					B		G	G	G											S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	P	F	M	R	R	L	M	L	L	S	G	E	T	V	N	V	A	I	R	N	G	N	E	A	V	L	I	G	Q	L	E	C	K	S	M	V	R	M	C	A	P	L	G	S	R	L	P	L	H	A	S	G	A	G	K	A	L	L	Y	P	L	A	E	E	E	L	M	S	I	I	L	Q	T	G	L	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	Q	P	H	L	E	K	L	S	H	K	V	H	E	S	S	S	V	S	I	L	D	G	A	D	I	V	Y	V	A	R	V	P	V	S	R	I	X	T	V	G	I	T	I	G	T	R	L	P	A	Y	A	T	S	X	G	R	V	L	L	A	G	L	P	D	D	E	L	D	A	Y	L	E	K	L	D	I	Q	R
Template Known Secondary structure																S									T	T										B		S	S	S		B				T	T					G	G	G	S									T	S											T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		F	T	P	T	T	L	V	D	M	P	T	L	L	K	D	L	E	Q	A	R	E	L	G	Y	T	V	D	K	E	E	H	V	V	G	L	N	C	I	A	S	A	I	Y	D	D	V	G	S	V	V	A	A	I	S	I	S	G	P	S	S	R	L	T	E	D	R	.	F	V	S	Q	G	E	L	V	R	D	T	A	R
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		L	T	E	R	T	I	T	A	R	D	E	L	K	A	A	I	L	A	V	R	A	D	G	I	C	V	L	D	Q	E	L	E	A	G	L	R	S	X	A	A	P	I	R	G	A	S	G	L	T	V	A	A	V	N	I	S	T	P	A	A	R	Y	S	L	E	D	L	H	S	D	L	I	P	S	L	R	V	T	A	T
Template Known Secondary structure			S	T	T	S																		S						S	S	S	S	T	T											T	T	S	S											G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	T	A	L	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	E	Q	D	L	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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