Job Description P0ACN4 Confidence 96.42% Date Thu Jan 5 11:18:36 GMT 2012 Rank 152 Aligned Residues 103 % Identity 16% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	L	Q	Y	L	E	K	S	G	G	S	S	S	V	S	D	I	S	L	N	L	D	L	P	L	S	T	T	F	R	L	L	K	V	L	Q	A	A	D	F	V	Y	Q	D	S	Q	L	G	W	W	H	I	G	L	G	V	F	N	V	G	A	A	Y	I	H	N	R	D	V	L	S	V	A	G	P	F	M	R
Query Conservation
Alig confidence														.																															.	.	.	.
Template Conservation														.																															.	.	.	.
Template Sequence		K	K	I	I	K	I	L	Q	N	D	G	K	.	A	P	L	R	E	I	S	K	I	T	G	L	A	E	S	T	I	H	E	R	I	R	K	L	R	E	S	G	V	I	.	.	.	.	K	K	F	T	A	I	I	D	P	E	A	L	G	Y	S	M	L	A	F	I	L	V	K	V	K	A	G	K	Y	S	E	V	A
Template Known Secondary structure												T	T	.											T	S															T	T	S	S	.	.	.	.									G	G	G	G	T													T	T
Template Predicted Secondary structure														.																															.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	L	M	L	L	S	G	E	T	V	N	V	A	I	R	N	G	N	E	.	A	V	L	I	G	Q	L	E	C
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		S	N	L	A	K	Y	P	E	I	V	E	V	Y	E	T	T	G	D	Y	D	M	V	V	K	I	R	T	K	N
Template Known Secondary structure						T	S	T	T								S	S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions