Return to main results Retrieve Phyre Job Id

Job DescriptionC1P601
Confidence2.11%DateThu Jan 5 10:55:53 GMT 2012
Rank48Aligned Residues17
% Identity41%Templatec3ifuA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:non-structural protein; PDBTitle: the crystal structure of porcine reproductive and2 respiratory syndrome virus (prrsv) leader protease nsp1
Resolution2.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60
Predicted Secondary structure 












Query SS confidence 
















Query Sequence  PLPSEAKQPKPPKECSP
Query Conservation 
















Alig confidence 
















Template Conservation   
 
  
   

 

 
Template Sequence  PLRWTLPRAFPTVECSP
Template Known Secondary structure 

SS
B





SS
SS
Template Predicted Secondary structure 









Template SS confidence 
















   56...60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions