Job Description C1P601 Confidence 4.04% Date Thu Jan 5 10:55:53 GMT 2012 Rank 14 Aligned Residues 23 % Identity 39% Template c1v9pB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		I	P	Q	I	L	P	L	.	.	.	.	.	P	S	E	A	K	Q	P	K	P	P	K	E	C	S	P	T	C
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.														.
Template Conservation																											.
Template Sequence		I	P	E	V	L	R	V	L	K	E	R	R	T	G	E	E	R	P	I	R	W	P	E	T	C	.	P	E	C
Template Known Secondary structure		S								G	G	G			S									S	B		.	T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		2385	.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.		2410	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions