Job Description P76419 Confidence 100.00% Date Thu Jan 5 12:22:54 GMT 2012 Rank 3 Aligned Residues 294 % Identity 21% Template d1vm7a_ SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.15

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		Q	S	V	M	V	V	G	A	A	V	I	D	V	I	A	D	A	Y	A	L	P	W	R	G	C	D	I	E	L	K	Q	Q	S	V	N	V	G	G	C	A	L	N	I	A	V	A	L	K	R	L	G	I	E	.	A	G	N	A	L	P	L	G	Q	G	V	W	A	E	M	I	R	N	R	M	A	K	E	G	L	I
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		L	V	I	S	V	V	G	S	S	N	I	D	I	V	L	K	V	D	H	F	T	K	P	G	E	T	Q	K	A	I	E	M	N	V	F	P	G	G	K	G	A	N	Q	A	V	T	V	A	K	I	G	E	K	G	C	R	F	V	T	C	I	G	N	D	D	Y	S	D	L	L	I	E	N	Y	E	K	L	G	I	T
Template Known Secondary structure																			S	S				T	T						S																						S	S										S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	D	N	A	E	G	D	N	G	W	C	L	A	L	V	E	P	D	G	E	R	T	F	M	S	F	S	G	V	E	N	Q	W	N	R	Q	W	L	A	R	L	T	V	A	P	G	S	L	L	Y	F	S	G	Y	Q	L	A	S	P	C	G	E	L	L	V	E	W	L	E	E	L	Q	D	V	T	P	F	I
Query Conservation
Alig confidence				.																																																								.	.	.	.	.
Template Conservation				.																																																								.	.	.	.	.
Template Sequence		G	Y	.	I	R	V	S	L	P	T	G	R	A	F	I	E	V	D	K	T	G	Q	N	R	I	I	I	F	P	G	A	N	A	E	L	K	K	E	L	I	D	W	N	T	L	S	E	S	D	I	L	L	L	Q	N	E	I	P	.	.	.	.	.	F	E	T	T	L	E	C	A	K	R	F	N	G	I	V	I	F
Template Known Secondary structure				.				S	S											T	T	S									G	G	G	G	G			G	G	G							T	T		S						S	S	S		.	.	.	.	.													S
Template Predicted Secondary structure				.																																																								.	.	.	.	.
Template SS confidence
		83	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	F	G	P	R	I	G	D	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	I	A	A	E	.	R	F	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	A	W	Y	F	S	N	D	A	S	G	C	I
Query Conservation																																						.
Alig confidence													.	.	.	.	.																					.
Template Conservation													.	.	.	.	.
Template Sequence		D	P	A	P	A	Q	G	I	N	E	E	.	.	.	.	.	I	F	Q	Y	L	D	Y	L	T	P	N	E	K	E	I	E	A	L	S	K	D	F	F	G	E	F	L	T	V	E	K	A	A	E	K	F	L	E	L	G	V	K	N	V	I	V	K	L	G	D	K	G	V	L	L	V	N	K	N	E	K	K	H	F
Template Known Secondary structure					S		T	T			G	G	.	.	.	.	.	G	G	G	G		S					B													S															T	T		S							G	G	G							T	T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		P	A	F	P	T	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S	G	L	P	L	A	D	A	V	L	L	G	N	A	V	A	S	W	V	V	G	H	R	G	G	.	D	C	A	P	T	R	E	E	L	L	L	A	H	K	N	V
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		P	T	F	K	V	K	A	V	D	T	T	A	A	G	D	V	F	N	G	A	F	A	V	A	L	S	E	G	K	N	P	E	E	A	V	I	F	G	T	A	A	A	A	I	S	V	T	R	L	G	A	Q	S	S	I	P	A	R	E	E	V	E	A	F	L	K	N	L
Template Known Secondary structure									S			T	T															T	T																		T	T	S	S	S	S	G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions