Job Description P76419 Confidence 99.76% Date Thu Jan 5 12:22:54 GMT 2012 Rank 46 Aligned Residues 176 % Identity 13% Template c3mbjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form) Resolution 2.10 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.																																	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.																																	.	.
Query Sequence		L	Y	F	S	G	Y	Q	L	A	S	P	C	G	E	L	L	V	E	W	L	E	E	L	Q	D	V	T	P	F	I	D	F	G	P	R	I	.	.	.	.	.	.	.	.	.	.	G	D	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	I	A	A	E	R	F	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.																																	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation
Template Sequence		A	I	Y	T	G	Y	L	G	S	P	R	Q	I	Q	I	V	S	D	F	I	K	D	F	R	Q	P	D	S	L	I	V	A	D	P	V	L	G	D	N	G	R	L	Y	T	N	F	D	X	E	X	V	K	E	X	R	H	L	I	T	K	A	D	V	I	T	P	N	L	T	E	L	F	Y	L	L	D	E	P	Y	K
Template Known Secondary structure										S																	T	T												T	T				T	T														T	T		S					B									T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
				214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.																														.	.	.	.	.
Query SS confidence		.	.																														.	.	.	.	.
Query Sequence		.	.	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	.	.	.	.	.	A	W	Y	F	S	N	D	A	S	G	C	I	P	A	F	P	T	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S	G	L	P	L	A
Query Conservation		.	.																														.	.	.	.	.
Alig confidence		.	.																														.	.	.	.	.
Template Conservation
Template Sequence		A	D	S	T	D	E	E	L	K	E	Y	L	R	L	L	S	D	K	G	P	Q	V	V	I	I	T	S	V	P	V	H	H	K	T	S	V	Y	A	Y	N	R	Q	G	N	R	Y	W	K	V	T	C	P	Y	L	P	A	H	Y	P	G	T	G	D	T	F	T	S	V	I	T	G	S	L	X	Q	G	D	S	L	P
Template Known Secondary structure		S																T	T	S		S																				T	T	T	T											S				T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		D	A	V	L	L	G	N	A	V	A	S	W	V	V	G	H	R	G	G	D	C	A	P	T	R	E	E	.	.	L	L	L	A	H	K	N	V
Query Conservation																													.	.
Alig confidence																													.	.
Template Conservation
Template Sequence		X	A	L	D	R	A	T	Q	F	I	L	Q	G	I	R	A	T	F	G	Y	E	Y	D	N	R	E	G	I	L	L	E	K	V	L	H	N	L
Template Known Secondary structure																				T	S				G	G	G								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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