Job Description P76419 Confidence 100.00% Date Thu Jan 5 12:22:54 GMT 2012 Rank 39 Aligned Residues 283 % Identity 14% Template c3julA_ PDB info PDB header:transferase Chain: A: PDB Molecule:lin2199 protein; PDBTitle: crystal structure of listeria innocua d-tagatose-6-phosphate2 kinase bound with substrate Resolution 2.40 Å

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		19	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		V	M	V	V	G	.	A	A	V	I	D	V	I	A	D	A	Y	A	L	P	W	R	G	C	D	I	E	L	K	Q	Q	S	V	N	V	G	G	C	A	L	N	I	A	V	A	L	K	R	L	G	I	E	A	G	N	A	L	P	L	G	Q	G	V	W	A	E	M	I	R	N	R	M	A	K	E	G	L	I	S	L
Query Conservation							.
Alig confidence							.																																																									.
Template Conservation																																																																.
Template Sequence		I	Y	T	I	T	L	N	P	A	I	D	R	L	L	F	I	R	G	E	L	E	K	R	K	T	N	R	V	I	K	T	E	F	D	C	G	G	K	G	L	H	V	S	G	V	L	S	K	F	G	I	K	N	E	A	L	G	I	A	G	S	D	.	N	L	D	K	L	Y	A	I	L	K	E	K	H	I	N	H	D
Template Known Secondary structure							S	S										S	S	S			S	S	S					S								S												T	T											S	T	.	T											T	T			B
Template Predicted Secondary structure																																																																.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		I	D	N	A	E	G	D	N	G	W	C	L	A	L	V	E	P	D	G	E	R	T	F	M	S	F	S	G	V	E	N	Q	W	N	R	Q	W	L	A	.	.	.	.	.	.	R	L	T	V	A	P	G	S	L	L	Y	F	S	G	Y	Q	L	A	S	P	C	G	E	L	L	V	E	W	L	E	E	L	Q	D	V
Query Conservation																																									.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	V	E	A	G	T	S	T	R	E	C	F	V	V	L	S	D	D	T	N	G	S	T	X	I	P	E	A	G	F	T	V	S	Q	T	N	K	D	N	L	L	K	Q	I	A	K	K	V	K	K	E	D	X	V	V	I	A	G	S	P	P	P	H	Y	T	L	S	D	F	K	E	L	L	R	T	V	K	A	T
Template Known Secondary structure						T	T												T	T		S																														T	T	S						S				T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	F	I	D	F	G	P	R	I	G	D	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	I	A	A	E	R	F	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	A	W	Y	F	S	N	D	A	S
Query Conservation
Alig confidence									.	.	.	.																																				.	.	.																															.
Template Conservation									.	.	.	.																																				.	.	.																															.
Template Sequence		G	A	F	L	G	C	D	.	.	.	.	N	S	G	E	Y	L	N	L	A	V	E	X	G	V	D	F	I	K	P	N	E	D	E	V	I	A	I	L	D	E	K	T	N	S	L	.	.	.	E	E	N	I	R	T	L	A	E	K	I	P	Y	L	V	V	S	L	G	A	K	G	S	I	C	A	H	N	G	K	.
Template Known Secondary structure		T							.	.	.	.													T		S					B									T			S	S			.	.	.									T	T		S							G	G	G							T	T		.
Template Predicted Secondary structure									.	.	.	.																																				.	.	.																															.
Template SS confidence
		161	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	I	P	A	F	P	T	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S	G	L	P	L	A	D	A	V	L	L	G	N	A	V	A	S	W	V	V	G	H	R	G	G	D	C	A	P	T	R	E	E	L	L	L	A	H	K	N	V
Query Conservation
Alig confidence		.	.	.	.	.	.																																																.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	Y	Q	V	I	P	P	T	G	A	G	D	V	F	V	G	A	F	I	A	G	L	A	X	N	X	P	I	T	E	T	L	K	V	A	T	G	C	S	A	S	K	V	X	Q	Q	F	.	.	.	.	.	D	L	E	A	A	G	K	L	K	N	Q	V
Template Known Secondary structure		.	.	.	.	.	.																								T	T																		T	T				.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																.	.	.	.	.
Template SS confidence
								233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.						280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions