Job Description P76419 Confidence 100.00% Date Thu Jan 5 12:22:54 GMT 2012 Rank 28 Aligned Residues 285 % Identity 19% Template c3gbuD_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized sugar kinase ph1459; PDBTitle: crystal structure of an uncharacterized sugar kinase ph1459 from2 pyrococcus horikoshii in complex with atp Resolution 2.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		V	M	V	V	G	A	A	V	I	D	V	I	A	D	A	Y	A	L	P	W	R	G	C	D	I	E	L	K	Q	Q	S	V	N	V	G	G	C	A	L	N	I	A	V	A	L	K	R	L	G	I	E	A	G	N	A	L	P	L	G	Q	G	V	W	A	E	M	I	R	N	R	M	A	K	E	G	L	I	S	.	.
Query Conservation																																																																																.	.
Alig confidence															.	.	.	.	.																																																													.	.
Template Conservation															.	.	.	.	.
Template Sequence		I	A	S	I	G	E	L	L	I	D	L	I	S	.	.	.	.	.	V	E	E	G	D	L	K	D	V	R	L	F	E	K	H	P	G	G	A	P	A	N	V	A	V	G	V	S	R	L	G	V	K	S	S	L	I	S	K	V	G	N	D	P	F	G	E	Y	L	I	E	E	L	S	K	E	N	V	D	T	R	G
Template Known Secondary structure						S									.	.	.	.	.	S	S	S	S		T	T	T																						T	T											S	S													T	T		B		T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	N	A	E	G	D	N	G	W	C	L	A	L	V	E	P	D	G	E	R	T	F	M	S	F	S	G	V	E	N	Q	W	N	R	Q	W	L	A	R	L	T	V	A	P	G	S	L	L	Y	F	S	G	Y	Q	L	A	S	P	C	G	E	L	L	V	E	W	L	E	E	L	Q	D	V	T	P	F	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	K	D	E	K	K	H	T	G	I	V	F	V	Q	L	K	G	A	S	P	S	F	L	L	Y	D	D	V	A	Y	F	N	X	T	L	N	D	I	N	W	D	I	V	E	E	A	K	I	V	N	F	G	S	V	I	L	A	R	N	P	S	R	E	T	V	X	K	V	I	K	K	I	K	G	S	S	L	I	A
Template Known Secondary structure						S	S	S											S	S	S								S	S	G	G	G				G	G	G										S						S	G	G	G	G	S	T	T													B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		177	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		F	G	P	.	.	.	.	.	.	.	.	R	I	G	D	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	I	A	A	E	R	F	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	A	W	Y	F	S	N
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	V	N	L	R	L	D	L	W	R	G	Q	E	E	E	X	I	K	V	L	E	E	S	I	K	L	A	D	I	V	K	A	S	E	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	E	N	Q	G	V	E	V	K	G	S	X	L	T	A	I	T	L	G	P	K	G	F	R	L	I	K	N
Template Known Secondary structure								G	G	G	G	T	T														T	T		S										.	.	.	.	.	.	.	.	.	.	.	.					T	T	T						S	S							G	G	G							T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.													.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		D	A	S	G	C	I	P	A	F	P	T	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	.	.	S	G	L	P	L	A	D	A	V	L	L	G	N	A	V	A	S	W	V	V	G	H	R	G	G	D	C	A	P	T	R	E	E	L	L	L	A	H	K	N
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		E	T	V	V	D	V	P	S	Y	N	V	N	P	L	D	T	T	G	A	G	D	A	F	X	A	A	L	L	V	G	I	L	K	L	K	G	L	D	L	L	K	L	G	K	F	A	N	L	V	A	A	L	S	T	Q	K	R	G	A	W	S	T	P	R	K	D	E	L	L	K	Y	K	E	A
Template Known Secondary structure		T													S			T	T																S	S	S																		T	T	S		S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions