Job Description P76419 Confidence 98.31% Date Thu Jan 5 12:22:54 GMT 2012 Rank 63 Aligned Residues 233 % Identity 20% Template c3drwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adp-specific phosphofructokinase; PDBTitle: crystal structure of a phosphofructokinase from pyrococcus2 horikoshii ot3 with amp Resolution 1.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	N	V	G	G	C	A	L	N	I	A	V	A	L	K	R	L	G	I	E	A	G	N	A	.	L	P	L	G	Q	G	V	W	A	E	M	I	R	N	R	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	G	L	I	S	L	I	D	N	A	E	G	D	N	G	W
Query Conservation																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	R	L	G	G	Q	A	G	I	I	A	N	T	L	A	G	L	K	I	R	K	V	I	A	Y	T	P	F	L	P	K	R	L	A	E	L	F	K	K	G	V	L	Y	P	V	V	E	N	G	E	L	Q	F	K	P	I	Q	E	A	Y	R	E	G	D	P	L	K	I	N	R	I	F	E	F	R	K	G	L	K
Template Known Secondary structure							S												T	T		S							S								T	T	S		T	T							S	S	S	S						G	G	G				T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		108					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																					.													.	.	.	.															.	.	.	.	.	.	.															.	.	.
Query SS confidence			.	.	.	.																					.													.	.	.	.															.	.	.	.	.	.	.															.	.	.
Query Sequence		C	.	.	.	.	L	A	L	V	E	P	D	G	E	R	T	F	M	S	F	S	G	V	E	N	.	Q	W	N	R	Q	W	L	A	R	L	T	V	.	.	.	.	A	P	G	S	L	L	Y	F	S	G	Y	Q	L	A	.	.	.	.	.	.	.	S	P	C	G	E	L	L	V	E	W	L	E	E	L	.	.	.
Query Conservation			.	.	.	.																					.													.	.	.	.															.	.	.	.	.	.	.															.	.	.
Alig confidence			.	.	.	.																					.													.	.	.	.															.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		F	K	L	G	D	E	T	I	E	I	P	N	S	G	R	F	I	V	S	A	R	F	E	S	I	S	R	I	E	T	R	E	D	I	K	P	F	L	G	E	I	G	K	E	V	D	G	A	I	F	S	G	Y	Q	G	L	R	T	K	Y	S	D	G	K	D	A	N	Y	Y	L	R	R	A	K	E	D	I	I	E	F
Template Known Secondary structure				S	S	S							S											S	G	G	G			S			T	T	T	G	G	G									S							G	G	G			S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
				169	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.														.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Q	D	V	T	P	F	I	D	F	G	P	R	I	G	D	.	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	A	E	R	F	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A
Query Conservation		.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	K	D	V	K	I	H	V	E	F	A	S	V	Q	D	R	K	L	R	K	K	I	I	T	N	I	L	P	F	V	D	S	V	G	I	D	E	A	E	I	A	Q	I	L	S	V	L	G	Y	R	E	L	A	D	R	I	F	T	Y	N	R	L	E	D	S	I	L	G	G	M	I	I	L	D	E	L	N	F	E
Template Known Secondary structure				T	T											S												T	G	G	G	S	S																	T																															S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		233	.	.	.	.	.	.	240	.	.	.	.	.	.																																																																		.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	I	V	R	L	D	K	E	G	A	W	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	Q	V	H	T	T	Y	Y	L	M	Y	I	T	H	R	D	N	P	L	S	E	E	E	L	A	K	S	L	E	F	G	T	T	L	A	A	A	R	A	S	L	G	D	I	R	G	P	D	D	Y	K	V	G	L	K	V	P	F	N	E	R	S	E	Y	V	K	L	R	F	E	E	A	K	S	R	L	R	M	R
Template Known Secondary structure								S	S								T	T		S	S																							S	S			S	G	G	G						T	S				T	T															S			T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		248	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		N	D	A	S	G	C	I	P	A	F	P	T	.	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		E	Y	K	V	V	V	I	P	T	R	L	V	Q	N	P	V	L	T	V	G	L	G	D	T	I	S	A	G	A	F	L	T	Y	L	E
Template Known Secondary structure		T												S	S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions