Job Description P76419 Confidence 100.00% Date Thu Jan 5 12:22:54 GMT 2012 Rank 16 Aligned Residues 288 % Identity 23% Template c3b1qD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ribokinase, putative; PDBTitle: structure of burkholderia thailandensis nucleoside kinase (bthnk) in2 complex with inosine Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	M	V	V	G	A	A	V	I	D	V	I	A	D	A	Y	A	L	P	W	R	G	C	D	I	E	L	K	Q	Q	S	V	N	V	G	G	C	A	L	N	I	A	V	A	L	K	R	L	G	I	E	A	G	N	A	L	P	L	G	Q	G	V	W	A	E	M	I	R	N	R	M	A	K	E	G	L	I	S	L
Query Conservation
Alig confidence																						.	.																																									.
Template Conservation																						.	.																																									.
Template Sequence		A	T	L	I	C	G	S	I	A	Y	D	N	I	M	T	F	E	G	R	F	.	.	N	L	S	F	L	V	P	T	M	R	R	E	F	G	G	C	A	G	N	I	A	Y	A	L	N	L	L	G	G	D	A	R	M	M	G	T	L	G	A	V	.	D	A	Q	P	Y	L	D	R	M	D	A	L	G	L	S	R	E
Template Known Secondary structure							S											S	S			.	.																												T											T	T	.	T												T
Template Predicted Secondary structure																						.	.																																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		98	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		I	D	N	A	E	G	.	.	D	N	G	W	C	L	A	L	V	E	P	D	G	E	R	T	F	M	S	F	S	G	V	E	N	Q	W	N	R	Q	W	L	A	R	L	T	V	A	P	G	S	L	L	Y	F	S	G	Y	Q	L	A	S	P	C	G	E	L	L	V	E	W	L	E	E	L	Q	D	V	T	P	F	I
Query Conservation								.	.
Alig confidence								.	.																																			.	.																.	.	.
Template Conservation																																												.	.																.	.	.
Template Sequence		Y	V	R	V	L	P	D	T	Y	S	A	Q	A	M	I	T	T	D	L	D	N	N	Q	I	T	A	F	H	P	G	A	M	M	Q	S	H	V	N	H	A	G	E	.	.	A	K	D	I	K	L	A	I	V	G	P	D	G	F	Q	.	.	.	G	M	V	Q	H	T	E	E	L	A	Q	A	G	V	P	F	I	F
Template Known Secondary structure							T	T												T	T										G	G	G	G	G	G	G	G	S		G	G	G	.	.			S		S						S					.	.	.													T
Template Predicted Secondary structure																																												.	.																.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	G	P	R	I	G	D	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	I	A	A	E	R	F	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	A	W	Y	F	S	N	D	A	S	G	C	I	P
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		D	P	G	Q	G	L	P	L	F	D	G	A	T	L	R	R	S	I	E	L	A	T	Y	I	A	V	N	D	Y	E	A	K	L	V	C	D	K	T	G	W	S	E	D	.	.	.	.	.	.	.	E	I	A	S	R	V	Q	A	L	I	I	T	R	G	E	H	G	A	T	I	R	H	R	D	G	T	E	Q	I	P
Template Known Secondary structure				G	G	G	G	G	G														S																						.	.	.	.	.	.	.				T	T	S	S							G	G	G							T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		256	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure						.																																															.
Query SS confidence						.																																															.
Query Sequence		A	F	P	T	.	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S	G	L	P	L	A	D	A	V	L	L	G	N	A	V	A	S	W	V	V	G	H	R	G	G	.	D	C	A	P	T	R	E	E	L	L	L	A	H	K	N
Query Conservation						.																																															.
Alig confidence						.																																															.
Template Conservation
Template Sequence		A	V	R	A	E	R	V	I	D	P	T	G	C	G	D	A	F	R	G	G	L	L	Y	G	I	E	H	G	F	D	W	A	T	A	G	R	L	A	S	L	M	G	A	L	K	I	A	H	Q	G	P	Q	T	Y	A	P	T	R	A	E	I	D	A	R	F	E	T
Template Known Secondary structure						S						T	T															T	T																			T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions