Job Description P76419 Confidence 100.00% Date Thu Jan 5 12:22:54 GMT 2012 Rank 19 Aligned Residues 292 % Identity 19% Template c2nwhA_ PDB info PDB header:signaling protein,transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: carbohydrate kinase from agrobacterium tumefaciens Resolution 1.86 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	V	M	V	V	G	A	A	V	I	D	V	I	A	D	A	Y	A	L	P	W	R	G	C	D	I	E	L	K	Q	Q	S	V	N	V	G	G	C	A	L	N	I	A	V	A	L	K	R	L	G	I	E	A	G	N	A	L	P	L	G	Q	G	V	W	A	E	M	I	R	N	R	M	A	K	E	G	L	I	S
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		K	K	I	L	V	L	G	G	A	H	I	D	R	R	G	M	I	E	T	E	T	A	P	G	A	S	N	P	G	S	.	W	M	E	E	A	G	G	G	G	F	N	A	A	R	N	L	S	R	L	G	F	E	V	R	I	I	A	P	R	G	G	D	V	T	G	E	V	V	A	E	A	A	R	Q	A	G	V	E	D
Template Known Secondary structure								S											S	S	S			T	T	S						.																			T	T											S	S													T	T
Template Predicted Secondary structure																																.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.																									.																	.	.	.	.
Query SS confidence		.																									.																	.	.	.	.
Query Sequence		.	L	I	D	N	A	E	G	D	N	G	W	C	L	A	L	V	E	P	D	G	E	R	T	F	.	M	S	F	S	G	V	E	N	Q	W	N	R	Q	W	L	A	.	.	.	.	R	L	T	V	A	P	G	S	L	L	Y	F	S	G	Y	Q	L	A	S	P	C	G	E	L	L	V	E	W	L	E	E	L	Q	D
Query Conservation		.																									.																	.	.	.	.
Alig confidence		.																									.																	.	.	.	.																										.
Template Conservation																																																																									.
Template Sequence		T	P	F	T	F	L	D	R	R	T	P	S	Y	T	A	I	L	E	R	D	G	N	L	V	I	A	L	A	D	M	D	L	Y	K	L	F	T	P	R	R	L	K	V	R	A	V	R	E	A	I	I	A	S	D	F	L	L	C	D	A	N	L	P	E	D	T	L	T	A	L	G	.	L	I	A	R	A	C	E	K
Template Known Secondary structure							T	T	S											T	T	S										G	G	G	G	G							T	S											S						T	T	S										.						T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	P	F	I	D	F	G	P	R	I	G	D	I	P	D	A	L	L	A	R	I	M	A	C	R	P	L	V	S	L	N	R	Q	E	A	E	I	A	A	E	R	F	A	L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	A	W	Y	F	S	N	D	A
Query Conservation
Alig confidence												.	.	.	.																															.	.	.	.	.	.	.
Template Conservation												.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		P	L	A	A	I	A	I	S	P	A	.	.	.	.	K	A	V	K	L	K	A	A	L	G	D	I	D	I	L	F	M	N	E	A	E	A	R	A	L	T	G	V	R	D	.	.	.	.	.	.	.	W	P	N	I	L	R	K	A	G	L	S	G	G	V	V	T	R	G	A	S	E	V	V	A	F	N	G	T	E
Template Known Secondary structure									S			.	.	.	.			G	G	G	T	T	T	G	G	G		S																T	T	.	.	.	.	.	.	.								T	T									T	T	T							S	S
Template Predicted Secondary structure												.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		251	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure						.																																																					.
Query SS confidence						.																																																					.
Query Sequence		S	G	C	I	.	P	A	F	P	T	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S	G	L	P	L	A	D	A	V	L	L	G	N	A	V	A	S	W	V	V	G	H	R	G	G	D	.	C	A	P	T	R	E	E	L	L	L	A	H	K	N	V
Query Conservation						.																																																					.
Alig confidence						.																																																					.
Template Conservation
Template Sequence		K	A	I	L	H	P	P	L	I	R	E	V	K	D	V	T	G	A	G	D	A	M	A	S	G	Y	L	A	A	I	A	E	G	K	T	I	R	E	A	L	R	Q	G	A	A	A	A	A	I	T	V	Q	S	S	F	A	T	S	Q	D	L	S	K	D	S	V	E	A	M	L	G	L	V
Template Known Secondary structure										S	S	S		S					S	S													T	T																			S	S	T	T			G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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