Job Description P76419 Confidence 26.30% Date Thu Jan 5 12:22:54 GMT 2012 Rank 161 Aligned Residues 77 % Identity 8% Template c1w7pD_ PDB info PDB header:protein transport Chain: D: PDB Molecule:vps36p, ylr417w; PDBTitle: the crystal structure of endosomal complex escrt-ii2 (vps22/vps25/vps36) Resolution 3.60 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		L	S	A	E	I	T	T	L	G	K	Q	W	Q	E	K	F	A	A	P	L	I	V	R	L	D	K	E	G	A	W	Y	F	S	N	D	A	S	G	C	I	P	A	F	P	T	Q	V	V	D	T	I	G	A	G	D	S	H	A	G	G	V	L	A	G	L	A	S	.	.	.	G	L	P	L	A	D	A	V	L	L
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		S	P	M	E	M	R	E	A	C	E	R	F	E	H	L	G	L	N	E	L	K	L	V	K	V	N	K	R	I	L	C	V	T	S	E	K	F	D	V	V	K	E	K	L	V	D	L	I	G	D	N	P	G	S	D	L	L	R	L	T	Q	I	L	S	S	N	N	S	K	S	N	W	T	L	G	I	L	M	E	V
Template Known Secondary structure											T	T	G	G	G	G	T		T	T							S	S	S						S	S														T	T	S	T	T											S		S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions