Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence95.93%DateThu Jan 5 12:10:53 GMT 2012
Rank83Aligned Residues116
% Identity16%Templated2d69a1
SCOP infoTIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.... .....120..... ....130. ........140 .
Predicted Secondary structure 











..



..



.....
.
Query SS confidence 










































. .










. .





. . . . .








.
Query Sequence  FAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG. . PLAVTFHRAFD. . MCANPL. . . . . YTLNNLAEL. G
Query Conservation     
  

      



 


 
  

 

      

  
 ..   







..   
  ..... 

  

 
.
Alig confidence 























....














..










..





.....








.
Template Conservation     
 


  
 
 

   

   ....  
  

  
        


 

 
  

       


  

 

 



Template Sequence  VNIMEKRAEMVANEGGQYVMIDIV. . . . VAGWSALQYMREVTEDLGLAIHAHRAMHAAFTRNPRHGITMLALAKAARMIG
Template Known Secondary structure  T

....
T

TTTS
TTSS

T
Template Predicted Secondary structure 




....





















Template SS confidence 















































































   231........240.........250.... .....260.........270.........280.........290.........300......
 
   142.......150.........160........ .170.........180......... 190.
Predicted Secondary structure 









.......






.

Query SS confidence 


























. . . . . . .




















.

Query Sequence  IARVLTSGQKSDALQGLSKIMELIAHR. . . . . . . DAPIIMAGAGVRAENLHHFLD. AG
Query Conservation    





    
  
   
  
   
.......    

 



   

  
  .

Alig confidence 


























.......




















.

Template Conservation 

        

              
       
   

 


     

      
Template Sequence  VDQIHTGTAVGKMAGNYEEIKRINDFLLSKWEHIRPVFPVASGGLHPGLMPELIRLFG
Template Known Secondary structure 
S




SSS


S

TT



SS

GGG
Template Predicted Secondary structure 























Template SS confidence 

























































   307..310.........320.........330.........340.........350.........360....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions