Job Description P67826 Confidence 95.15% Date Thu Jan 5 12:10:53 GMT 2012 Rank 96 Aligned Residues 147 % Identity 14% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140		.	.	.	.
Predicted Secondary structure																																																				.	.	.	.								.	.	.												.
Query SS confidence																																																				.	.	.	.								.	.	.												.
Query Sequence		A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	.	.	.	.	A	F	D	M	C	A	N	.	.	.	P	L	Y	T	L	N	N	L	A	E	L	.	G	I	A	R
Query Conservation																																																				.	.	.	.								.	.	.												.
Alig confidence																									.	.	.	.																.								.	.	.	.								.	.	.												.
Template Conservation																									.	.	.	.																.
Template Sequence		D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	.	.	.	.	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	.	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A
Template Known Secondary structure		G	G												T										.	.	.	.															S	.	S							T	T	T						S	T	T	S	S														T		S
Template Predicted Secondary structure																									.	.	.	.																.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																						.
Query SS confidence																										.	.	.	.	.	.	.																						.
Query Sequence		V	L	T	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	.	.	.	.	.	.	.	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	.	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q	G	L	S	M
Query Conservation																										.	.	.	.	.	.	.																						.
Alig confidence																										.	.	.	.	.	.	.																						.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	M	P	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	T	T	S	S	S														S			T	T											S	B		T	T	T										S	S		S				B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	E	H	A	D	E	Y	S	R	Y	I	V	D	G	A	A	V	A	E	M	K	G	I	I	E	R	H
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		G	R	G	V	F	G	H	P	M	G	P	.	.	.	.	K	A	G	A	K	S	I	R	Q	A	W	E	A	I
Template Known Secondary structure		S	S	S	S	S	S		T	T			.	.	.	.
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions