 |
Job Description | P67826 | Confidence | 45.45% | Date | Thu Jan 5 12:10:53 GMT 2012 |
Rank | 395 | Aligned Residues | 100 |
% Identity | 17% | Template | d1xima_ |
SCOP info | TIM beta/alpha-barrel
| Xylose isomerase-like
| Xylose isomerase
|
Resolution | 2.20 |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | |
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
Query Sequence |   |
E | C | A | L | T | A | Q | Q | N | G | A | D | R | V | E | L | C | A | A | . |
P | K | E | G | G | L | T | P | S | . |
. |
. |
. |
. |
L | G | V | L | K | S | V | R | Q | R | V | T | I | P | V | H | P | I | I | R | P | R | . |
. |
. |
. |
. |
. |
. |
. |
G | G | D | F | C | Y | S | D | G | E | . |
. |
. |
. |
. |
F |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   | . |
|   |   |
|
|
|
|
|
| . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
| . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|   |   |
| . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
Template Conservation |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
| . |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|
Template Sequence |   |
E | A | V | H | K | L | A | E | I | G | A | Y | G | I | T | F | H | D | D | D | L | V | P | F | G | S | D | A | Q | T | R | D | G | I | I | A | G | F | K | K | A | L | D | E | T | G | L | I | V | P | M | V | T | . |
T | N | L | F | T | H | P | V | F | K | D | G | G | F | T | S | N | D | R | S | V | R | R | Y | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| B |  |  |  |  | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| B |
|
|  |  |  | . |
|
|
| S | S | S | G | G | G | T | T |
| S | T | T |
| S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | I | L | E | D | V | R | T | V | R | E | L | G | F | P | G | L | V | T | . |
. |
. |
. |
. |
G | V | L | D | V | D | G | N | V | D | M | P | R | M | E | K | I | M | A | A |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|   |
|
| . | . | . | . | . |
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
R | K | V | L | R | Q | M | D | L | G | A | E | L | G | A | K | T | L | V | L | W | G | G | R | E | G | A | E | Y | D | S | A | K | D | V | S | A | A | L | D | R | Y | R | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T | S |  |  | S | S | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|