Job Description P67826 Confidence 96.78% Date Thu Jan 5 12:10:53 GMT 2012 Rank 54 Aligned Residues 146 % Identity 22% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	.
Query Conservation																																																																																	.
Alig confidence																						.	.	.	.	.	.																																		.	.																			.
Template Conservation																						.	.	.	.	.	.																																		.	.
Template Sequence		V	A	P	N	H	L	E	L	G	L	V	S	Q	S	V	D	I	P	V	Y	.	.	.	.	.	.	A	Q	G	A	D	V	E	A	G	G	A	H	T	A	H	V	S	L	E	N	I	K	E	A	G	G	S	G	V	I	L	N	H	.	.	S	E	A	P	L	K	L	N	D	L	A	R	L	V	A	K	A	K	S
Template Known Secondary structure						G	G	G						T	T		S	S		B		.	.	.	.	.	.		S			S	B	S	S		S	S		T	T			B								T									.	.	T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.																																		.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.
Predicted Secondary structure		.																																.	.	.	.	.	.	.										.	.	.																											.
Query SS confidence		.																																.	.	.	.	.	.	.										.	.	.																											.
Query Sequence		.	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	.	.	.	.	.	.	.	L	T	S	G	Q	K	S	D	A	.	.	.	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	A	G	V	R	.	A	E
Query Conservation		.																																.	.	.	.	.	.	.										.	.	.																											.
Alig confidence		.						.	.	.	.	.	.																					.	.	.	.	.	.	.										.	.	.																											.
Template Conservation								.	.	.	.	.	.
Template Sequence		L	G	L	D	V	V	.	.	.	.	.	.	V	C	A	P	D	P	R	T	S	L	A	A	A	A	L	G	P	H	A	V	A	V	E	P	P	E	L	I	G	T	G	R	A	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	S	V	I	T	G	A	G	I	E	S	G	D
Template Known Secondary structure		T	T					.	.	.	.	.	.				S	S										T			S							G	G	G	T	T	T	S																							T	T	S						S	S			S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	H	H	F	L	D	A	G	V	L	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	A	A	L	R	L	G	T	R	G	V
Template Known Secondary structure									T	T		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions