|   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | C | A | L | T | A | Q | Q | N | G | A | D | R | V | E | L | C | . |
. |
A | A | P | K | E | G | G | L | T | P | S | L | G | V | L | K | S | V | R | Q | R | V | T | I | P | V | H | P | I | I | R | P | R | G | G | D | F | C | Y | S | D | G | E | F | A | A | I | L | E | D | V | R | T | V | R | E | L | G | F | P | G |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
| . | . |
|   |
|   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
E | Q | V | K | A | I | E | Q | A | G | C | D | W | I | H | V | D | V | M | D | G | R | F | V | P | N | I | T | I | G | P | L | V | V | D | S | L | R | P | I | T | D | L | P | L | D | V | H | L | M | I | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | Q | R | V | P | D | F | I | K | A | G | A | D | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  | B | S | S | S | S | S |
| B |
|
|
|  |  |  |  |  |  |  | G | G | G |
|
| S |
|  |  |  |  |  |  | S | S | S | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
|
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | T | G | V | L | D | V | D | G | N | V | D | M | P | R | M | E | K | I | M | A | A | A | G | P | L | A | V | T | F | H | R | A | F | D | M | C | A | N | P | L | Y | T | L | N | N | L | A | E | L | G | I | A | R | V | L | T | . |
. |
. |
. |
S | G | Q | K | S | D | A | L | Q | G | L | S | K | I | M | E | L | I |
Query Conservation |   |
  |
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
| . | . | . | . |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
V | S | V | H | C | . |
. |
. |
. |
E | Q | S | S | T | I | H | L | H | R | T | I | N | Q | I | K | S | L | G | A | K | A | G | V | V | L | N | P | G | T | P | L | T | A | I | E | Y | V | L | D | A | V | D | L | V | L | I | M | S | V | N | P | G | F | G | G | Q | S | F | I | E | S | Q | V | K | K | I | S | D | L | R |
Template Known Secondary structure |   |
 |  |  |  |
| . | . | . | . | S | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |
| T | T |
|
| G | G | G | G | T | T | T | T | T | T |
| S |  |  |  |  |  | S | S |
| T | T |
| S | S |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | |
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
166 | . | |
|
|
|
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | . |
. |
. |
. |
R | D | A | P | I | I | M | A | G | A | G | V | R | A | E | N | L | H | H | F | L | D | A | G | V | L | E | V |
Query Conservation |   |
  |   | . | . | . | . |
|   |   |   |   |
|
|   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
K | I | C | A | E | R | G | L | N | P | W | I | E | V | D | G | G | V | G | P | K | N | A | Y | K | V | I | E | A | G | A | N | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|
|
|  |  |  |  |  | S | S |
|
| T | T | T |  |  |  |  |  |  |  | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |