Return to main results Retrieve Phyre Job Id

Job DescriptionP67826
Confidence98.18%DateThu Jan 5 12:10:53 GMT 2012
Rank29Aligned Residues167
% Identity19%Templated1rd5a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30... ......40 .........50.........60.........70.
Predicted Secondary structure 








.................





..












Query SS confidence 






















. . . . . . . . . . . . . . . . .






. .






























Query Sequence  MECALTAQQNGADRVELCAAPKE. . . . . . . . . . . . . . . . . GGLTPSL. . GVLKSVRQRVTIPVHPIIRPRGGDFCYSDGE
Query Conservation     
  
   








 
  .................





 ..
          


 





 


 

  
Alig confidence 






















.................






..
















........



..
Template Conservation        
   


 



 




  

  
      

  
         
  

    




 ........ 
 
..
Template Sequence  AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLL. . . . . . . . SYYK. .
Template Known Secondary structure  TT
SS


S

TTS
TTT

GGG
SS
........

S..
Template Predicted Secondary structure 





















........


..
Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100 ....
 
   72.......80.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 























.....
Query SS confidence 










































































. . . . .
Query Sequence  FAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVL. . . . .
Query Conservation     
  

      



 


 
  

 

      

  
    







   
   

  

 

  


.....
Alig confidence  .

























...




















....



















.....
Template Conservation  .      
     

   
    
   ...            
   
  
 ....  
               
      
Template Sequence  . PIMFRSLAKMKEAGVHGLIVPDLPYV. . . AAHSLWSEAKNNNLELVLLTT. . . . PAIPEDRMKEITKASEGFVYLVSVN
Template Known Secondary structure  .S

TTT


TT

TT...TTT


....TTS


S

SS
Template Predicted Secondary structure  .













...




....






Template SS confidence 















































































   105....110.........120.........130 .........140.........150. ........160.........170......
 
   147..150.........160.........170......... 180.........190.....
Predicted Secondary structure  .













.




Query SS confidence  .
































.















Query Sequence  . TSGQKSDALQGLSKIMELIAHRDAPIIMAGAGV. RAENLHHFLDAGVLEV
Query Conservation  .


    
  
   
  
   
    

 



.   

  
  

    
Alig confidence  .
































.















Template Conservation 
               
  

     







 
 
        




Template Sequence  GVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGV
Template Known Secondary structure 

B
TTS
B
T
SS
S


STT
S
Template Predicted Secondary structure 





















Template SS confidence 


















































   177..180.........190.........200.........210.........220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions