Job Description P67826 Confidence 64.97% Date Thu Jan 5 12:10:53 GMT 2012 Rank 294 Aligned Residues 150 % Identity 15% Template c3q45E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val Resolution 3.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	.	.	.	.	.	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																																					.
Template Conservation																																																														.
Template Sequence		I	A	L	Y	D	L	A	A	Q	H	A	G	L	P	L	Y	A	F	L	G	G	K	K	D	K	I	I	Q	T	D	Y	T	V	S	I	D	E	P	H	K	M	A	A	D	A	V	Q	I	K	K	N	G	F	E	I	I	K	V	K	V	.	G	G	S	K	E	L	D	V	E	R	I	R	M	I	R	E	A	A	G
Template Known Secondary structure													T	S	B					T	T					S				B						S																T	T		S							.		S
Template Predicted Secondary structure																																																														.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		115				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		P	.	.	.	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G
Query Conservation			.	.	.
Alig confidence			.	.	.											.																				.	.	.	.
Template Conservation																.																				.	.	.	.
Template Sequence		D	S	I	T	L	R	I	D	A	N	Q	G	W	S	.	V	E	T	A	I	E	T	L	T	L	L	E	P	Y	N	I	Q	H	C	.	.	.	.	E	E	P	V	S	R	N	L	Y	T	A	L	P	K	I	R	Q	A	C	R	I	P	I	M	A	D	E	S	C	C	N	S	F	D	A	E	R	L	I	Q	I	Q
Template Known Secondary structure		S	S	S							T	T		B		.												G	G	G			S			.	.	.	.				B		G	G	G	G	G	G									S	S					S	T	T			S										T	T
Template Predicted Secondary structure																.																				.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		192	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	C	D	S
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions