Job Description P67826 Confidence 97.75% Date Thu Jan 5 12:10:53 GMT 2012 Rank 41 Aligned Residues 165 % Identity 18% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																			.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.
Query Sequence		S	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	P	K	E	G	G	L	T	P	S	L	.	G	V	L	K	S	V	R	Q	R	.	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.										.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	P	E	T	P	I	G	L	L	M	.	.	.	.	.	.	.	Y	A	N	L
Template Known Secondary structure												T	T		S	S										T	T																T	T																		T	T	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	P	L	A	V	T	F	H	R	A	F	D	M	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	.	.	G	I	A	R	V	L	T
Query Conservation																																																																									.	.
Alig confidence																									.	.	.	.																									.	.	.																		.	.
Template Conservation																									.	.	.	.																									.	.	.
Template Sequence		V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	.	.	.	A	D	V	P	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	.	.	.	I	A	P	P	T	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S
Template Known Secondary structure				T	T													T							.	.	.	.	T	T	S		G	G	G											T	T						.	.	.				T	T			S												S
Template Predicted Secondary structure																									.	.	.	.																									.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	A	G	V	.	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V
Query Conservation																																		.
Alig confidence			.	.	.	.	.	.	.																									.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	A	P	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	A	G	A	A	G	A
Template Known Secondary structure			.	.	.	.	.	.	.													T	T								S	S			S										T	T		S
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		179								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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