Job Description P67826 Confidence 85.61% Date Thu Jan 5 12:10:53 GMT 2012 Rank 187 Aligned Residues 170 % Identity 16% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10							.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																														.	.												.												.	.
Query SS confidence												.	.	.	.	.	.																														.	.												.												.	.
Query Sequence		M	A	L	L	E	I	C	C	Y	S	.	.	.	.	.	.	M	E	C	A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	.	.	L	G	V	L	K	S	V	R	Q	R	V	.	T	I	P	V	H	P	I	I	R	P	R	.	.	G	G	D	F	C	Y	S	D
Query Conservation												.	.	.	.	.	.																														.	.												.												.	.
Alig confidence												.	.	.	.	.	.																														.	.												.												.	.
Template Conservation
Template Sequence		R	P	K	I	C	V	P	I	I	G	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R
Template Known Secondary structure		S										S	S											T	T	T	S	S		S						G	G	G		T	T	T	T																	T	T	S									G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.
Predicted Secondary structure																			.																													.	.										.											.	.	.
Query SS confidence																			.																													.	.										.											.	.	.
Query Sequence		G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	.	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	M	P	R	M	E	K	I	M	A	A	A	G	.	.	P	L	A	V	T	F	H	R	A	.	F	D	M	C	A	N	P	L	Y	T	.	.	.	L	N	N	L	A	E	L	G	I
Query Conservation																			.																													.	.										.											.	.	.
Alig confidence										.	.	.							.			.	.	.	.	.																						.	.										.											.	.	.
Template Conservation										.	.	.										.	.	.	.	.
Template Sequence		D	Y	Y	T	T	L	N	K	.	.	.	E	I	S	N	T	G	L	V	D	.	.	.	.	.	L	I	D	V	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H	D	F	N	K	T	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A
Template Known Secondary structure										.	.	.					T	S			S	.	.	.	.	.						G	G	G															T	T										S	S																		T	T
Template Predicted Secondary structure										.	.	.										.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		A	R	V	L	T	S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	M	E	L	I	A	H	.	.	.	.	R	D	A	P	I	I	M	A	G	A	G
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.
Template Conservation
Template Sequence		D	L	P	K	I	A	V	M	P	Q	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T	M	S	M	S
Template Known Secondary structure		S									S	S																	T	T		S	S		B						T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions