Job Description P67826 Confidence 81.04% Date Thu Jan 5 12:10:53 GMT 2012 Rank 212 Aligned Residues 211 % Identity 16% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		A	L	T	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	.	.	.	.	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L	E	D	V	R	T	V	R	E	L	G	F	P	G
Query Conservation																																							.	.	.	.
Alig confidence																					.	.	.	.	.	.													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	.	.	.	.	.	.	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	D	A	R	V	A	V	E	T	G	V	D	G
Template Known Secondary structure									T		S							G	G	G	.	.	.	.	.	.													T	S			S	S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure																					.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.															.	.	110	.	.	.	.	.	.	.	.	.	120	.
		90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.			.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.														.	.									.	.								.																				.	.
Query SS confidence														.	.	.	.	.	.	.	.														.	.									.	.								.																				.	.
Query Sequence		L	V	T	G	V	L	D	V	D	G	N	V	.	.	.	.	.	.	.	.	D	M	P	R	M	E	K	I	M	A	A	A	G	.	.	P	L	A	V	T	F	H	R	.	.	A	F	D	M	C	A	N	.	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	S	.	.	G	Q	K	S	D	A
Query Conservation														.	.	.	.	.	.	.	.														.	.									.	.								.																				.	.
Alig confidence														.	.	.	.	.	.	.	.														.	.									.	.								.																				.	.
Template Conservation
Template Sequence		V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	T	V	G	C	A	T	P
Template Known Secondary structure								G	G	G																										T	T								T	T	G	G	G	S																		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		L	Q	G	L	S	K	I	M	E	L	I	A	H	R	D	A	P	I	I	M	A	G	A	.	.	.	.	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	M	R	Y	R	N	Q	G	L	S	M	S	S	D	E	H	A	D	E	Y	S	R	Y	I	V
Query Conservation																									.	.	.	.
Alig confidence															.										.	.	.	.
Template Conservation															.
Template Sequence		R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I	D	T	S	I	L	G	I	G	E	R	N	G	I	T	P	L	G	A	L	L	A	R	M	Y	V	T	D	R	E	Y	I	T	H	K	Y
Template Known Secondary structure															.		S	S							B		T	T	S													T							B	G	G	G		S	S	T	T		B		B																				S
Template Predicted Secondary structure															.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	A	A	V	A	E	M	K	G	I	I	E	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	N	Q	L	R	E	L	E	N	L	V	A	D	A
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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